[MissingFeature] Database [*********] has reference(s) to a missing feature - Removing features from a content database in SharePoint 2010 using PowerShell

Open SharePoint PoweShell and paste this scripts:

function Remove-SPFeatureFromContentDB($ContentDb, $FeatureId, [switch]$ReportOnly)
{
    $db = Get-SPDatabase | where { $_.Name -eq $ContentDb }
    [bool]$report = $false
    if ($ReportOnly) { $report = $true }
   
    $db.Sites | ForEach-Object {
       
        Remove-SPFeature -obj $_ -objName "site collection" -featId $FeatureId -report $report
               
        $_ | Get-SPWeb -Limit all | ForEach-Object {
           
            Remove-SPFeature -obj $_ -objName "site" -featId $FeatureId -report $report
        }
    }
}

function Remove-SPFeature($obj, $objName, $featId, [bool]$report)
{
    $feature = $obj.Features[$featId]
   
    if ($feature -ne $null) {
        if ($report) {
            write-host "Feature found in" $objName ":" $obj.Url -foregroundcolor Red
        }
        else
        {
            try {
                $obj.Features.Remove($feature.DefinitionId, $true)
                write-host "Feature successfully removed from" $objName ":" $obj.Url -foregroundcolor Red
            }
            catch {
                write-host "There has been an error trying to remove the feature:" $_
            }
        }
    }
    else {
        #write-host "Feature ID specified does not exist in" $objName ":" $obj.Url
    }
}

Next:

Paste this command for all MissingFeatures

Remove-SPFeatureFromContentDB -ContentDB "WSS_Intranet01" -FeatureId "5eac763d-fbf5-4d6f-a76b-eded7dd7b0a5"